IL_6NWY_231

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAGC*GUGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NWY|1|XA|G|1416
6NWY|1|XA|G|1417
6NWY|1|XA|A|1418
6NWY|1|XA|G|1419
6NWY|1|XA|C|1420
*
6NWY|1|XA|G|1480
6NWY|1|XA|U|1481
6NWY|1|XA|G|1482
6NWY|1|XA|A|1483
6NWY|1|XA|C|1484

Current chains

Chain XA

16S rRNA

Nearby chains

Chain YA

Large subunit ribosomal RNA; LSU rRNA

Chain YO

50S ribosomal protein L14