3D structure

PDB id
6O3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.97 Å

Loop

Sequence
GGG*UU
Length
5 nucleotides
Bulged bases
6O3M|1|QA|G|926
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6O3M_036 not in the Motif Atlas
Homologous match to IL_4LFB_036
Geometric discrepancy: 0.0893
The information below is about IL_4LFB_036
Detailed Annotation
Single bulged G
Broad Annotation
No text annotation
Motif group
IL_00225.14
Basepair signature
cWW-L-cWW
Number of instances in this motif group
50

Unit IDs

6O3M|1|QA|G|925
6O3M|1|QA|G|926
6O3M|1|QA|G|927
*
6O3M|1|QA|U|1390
6O3M|1|QA|U|1391

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QX
mRNA

Coloring options:


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