IL_6O3M_068

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

GGC*GUAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O3M_068 not in the Motif Atlas

Geometric match to IL_6DME_003

Geometric discrepancy: 0.3134

The information below is about IL_6DME_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_55516.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

7

Unit IDs

6O3M|1|RA|G|273
6O3M|1|RA|G|273|||A
6O3M|1|RA|C|273|||B
*
6O3M|1|RA|G|363|||D
6O3M|1|RA|U|363|||E
6O3M|1|RA|A|363|||F
6O3M|1|RA|C|364

Current chains

Chain RA

23S rRNA

Nearby chains