3D structure

PDB id
6O3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.97 Å

Loop

Sequence
UAG*CGAAA
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6O3M_072 not in the Motif Atlas
Homologous match to IL_7RQB_013
Geometric discrepancy: 0.1089
The information below is about IL_7RQB_013
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_69440.1
Basepair signature
cWW-L-R-cSH-cWW
Number of instances in this motif group
3

Unit IDs

6O3M|1|RA|U|293
6O3M|1|RA|A|294
6O3M|1|RA|G|295
*
6O3M|1|RA|C|343
6O3M|1|RA|G|344
6O3M|1|RA|A|345
6O3M|1|RA|A|346
6O3M|1|RA|A|347

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RY
50S ribosomal protein L24

Coloring options:


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