3D structure

PDB id
6O3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.97 Å

Loop

Sequence
UGCAU*AUG
Length
8 nucleotides
Bulged bases
6O3M|1|XA|C|1054
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6O3M_215 not in the Motif Atlas
Homologous match to IL_6CZR_154
Geometric discrepancy: 0.1594
The information below is about IL_6CZR_154
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_76319.4
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
4

Unit IDs

6O3M|1|XA|U|1052
6O3M|1|XA|G|1053
6O3M|1|XA|C|1054
6O3M|1|XA|A|1055
6O3M|1|XA|U|1056
*
6O3M|1|XA|A|1204
6O3M|1|XA|U|1205
6O3M|1|XA|G|1206

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XC
30S ribosomal protein S3
Chain XJ
30S ribosomal protein S10
Chain XN
30S ribosomal protein S14 type Z

Coloring options:


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