3D structure

PDB id
6O3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.97 Å

Loop

Sequence
GGAGC*GCGCCGGUGAAAUAC
Length
20 nucleotides
Bulged bases
6O3M|1|YA|A|2126, 6O3M|1|YA|U|2167
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6O3M|1|YA|G|2124
6O3M|1|YA|G|2125
6O3M|1|YA|A|2126
6O3M|1|YA|G|2127
6O3M|1|YA|C|2128
*
6O3M|1|YA|G|2160
6O3M|1|YA|C|2161
6O3M|1|YA|G|2162
6O3M|1|YA|C|2163
6O3M|1|YA|C|2164
6O3M|1|YA|G|2165
6O3M|1|YA|G|2166
6O3M|1|YA|U|2167
6O3M|1|YA|G|2168
6O3M|1|YA|A|2169
6O3M|1|YA|A|2170
6O3M|1|YA|A|2171
6O3M|1|YA|U|2172
6O3M|1|YA|A|2173
6O3M|1|YA|C|2174

Current chains

Chain YA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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