IL_6O3M_363

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

6O3M|1|XA|U|1125, 6O3M|1|XA|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O3M|1|XA|G|1124
6O3M|1|XA|U|1125
6O3M|1|XA|U|1126
6O3M|1|XA|G|1127
6O3M|1|XA|C|1128
6O3M|1|XA|C|1129
6O3M|1|XA|A|1130
6O3M|1|XA|G|1131
6O3M|1|XA|C|1132
*
6O3M|1|XA|G|1142
6O3M|1|XA|G|1143
6O3M|1|XA|G|1144
6O3M|1|XA|C|1145
6O3M|1|XA|A|1146
6O3M|1|XA|C|1147
6O3M|1|XA|U|1148
6O3M|1|XA|C|1149

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10