IL_6O3M_370

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CUCG*CACGCGAG

Length

12 nucleotides

Bulged bases

6O3M|1|YA|A|2572, 6O3M|1|YA|C|2573, 6O3M|1|YA|G|2576, 6O3M|1|YA|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O3M|1|YA|C|2510
6O3M|1|YA|U|2511
6O3M|1|YA|C|2512
6O3M|1|YA|G|2513
*
6O3M|1|YA|C|2571
6O3M|1|YA|A|2572
6O3M|1|YA|C|2573
6O3M|1|YA|G|2574
6O3M|1|YA|C|2575
6O3M|1|YA|G|2576
6O3M|1|YA|A|2577
6O3M|1|YA|G|2578

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y5

50S ribosomal protein L32

Chain YE

50S ribosomal protein L3

Chain YN

50S ribosomal protein L13