IL_6O7K_037

3D structure

PDB id

6O7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CAAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O7K_037 not in the Motif Atlas

Homologous match to IL_5J7L_037

Geometric discrepancy: 0.0981

The information below is about IL_5J7L_037

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

6O7K|1|g|C|779
6O7K|1|g|A|780
6O7K|1|g|A|781
6O7K|1|g|A|782
6O7K|1|g|C|783
*
6O7K|1|g|G|799
6O7K|1|g|G|800
6O7K|1|g|U|801
6O7K|1|g|A|802
6O7K|1|g|G|803

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain 2

30S ribosomal protein S21

Chain q

30S ribosomal protein S11