IL_6O7K_062

3D structure

PDB id

6O7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O7K_062 not in the Motif Atlas

Homologous match to IL_4LFB_060

Geometric discrepancy: 0.2204

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

6O7K|1|g|G|1416
6O7K|1|g|G|1417
6O7K|1|g|A|1418
6O7K|1|g|G|1419
*
6O7K|1|g|U|1481
6O7K|1|g|G|1482
6O7K|1|g|A|1483
6O7K|1|g|C|1484

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain f

Translation initiation factor IF-2

Chain t

30S ribosomal protein S12