IL_6O8W_024

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8W_024 not in the Motif Atlas

Geometric match to IL_4WF9_024

Geometric discrepancy: 0.1184

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

24

Unit IDs

6O8W|1|A|U|743
6O8W|1|A|G|744
6O8W|1|A|A|745
6O8W|1|A|A|746
6O8W|1|A|G|747
*
6O8W|1|A|U|764
6O8W|1|A|G|765
6O8W|1|A|G|766
6O8W|1|A|A|767
6O8W|1|A|G|768

Current chains

Chain A

50S subunit

Nearby chains

Chain C

50S ribosomal protein L2