IL_6O8W_072

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8W_072 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1542

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

6O8W|1|A|U|1878
6O8W|1|A|U|1879
6O8W|1|A|A|1880
6O8W|1|A|G|1881
*
6O8W|1|A|C|1888
6O8W|1|A|G|1889
6O8W|1|A|A|1890
6O8W|1|A|A|1891
6O8W|1|A|G|1892

Current chains

Chain A

50S subunit

Nearby chains