IL_6O8W_077

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

6O8W|1|A|C|2069, 6O8W|1|A|U|2627, 6O8W|1|A|A|2628

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8W_077 not in the Motif Atlas

Homologous match to IL_5J7L_321

Geometric discrepancy: 0.1225

The information below is about IL_5J7L_321

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

6O8W|1|A|A|2068
6O8W|1|A|C|2069
6O8W|1|A|G|2070
*
6O8W|1|A|C|2626
6O8W|1|A|U|2627
6O8W|1|A|A|2628
6O8W|1|A|U|2629

Current chains

Chain A

50S subunit

Nearby chains

Chain 2

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain T

50S ribosomal protein L22