IL_6O8W_100

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

6O8W|1|A|A|2586, 6O8W|1|A|C|2587

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8W_100 not in the Motif Atlas

Homologous match to IL_7RQB_098

Geometric discrepancy: 0.1247

The information below is about IL_7RQB_098

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

6O8W|1|A|C|2526
6O8W|1|A|G|2527
*
6O8W|1|A|C|2585
6O8W|1|A|A|2586
6O8W|1|A|C|2587
6O8W|1|A|G|2588

Current chains

Chain A

50S subunit

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L13