3D structure

PDB id
6O8W (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
Experimental method
ELECTRON MICROSCOPY
Resolution
3.53 Å

Loop

Sequence
GAAUUGA*UAUC
Length
11 nucleotides
Bulged bases
6O8W|1|A|U|886, 6O8W|1|A|G|887
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6O8W|1|A|G|882
6O8W|1|A|A|883
6O8W|1|A|A|884
6O8W|1|A|U|885
6O8W|1|A|U|886
6O8W|1|A|G|887
6O8W|1|A|A|888
*
6O8W|1|A|U|973
6O8W|1|A|A|974
6O8W|1|A|U|975
6O8W|1|A|C|976

Current chains

Chain A
50S subunit

Nearby chains

Chain 0
50S ribosomal protein L30
Chain 5
50S ribosomal protein L35

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0522 s