IL_6O8W_199

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

GAGGUAGAGCACUG*UAAACUCCGAAUGCC

Length

29 nucleotides

Bulged bases

6O8W|1|A|C|906, 6O8W|1|A|A|907, 6O8W|1|A|U|954, 6O8W|1|A|U|960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O8W|1|A|G|897
6O8W|1|A|A|898
6O8W|1|A|G|899
6O8W|1|A|G|900
6O8W|1|A|U|901
6O8W|1|A|A|902
6O8W|1|A|G|903
6O8W|1|A|A|904
6O8W|1|A|G|905
6O8W|1|A|C|906
6O8W|1|A|A|907
6O8W|1|A|C|908
6O8W|1|A|U|909
6O8W|1|A|G|910
*
6O8W|1|A|U|949
6O8W|1|A|A|950
6O8W|1|A|A|951
6O8W|1|A|A|952
6O8W|1|A|C|953
6O8W|1|A|U|954
6O8W|1|A|C|955
6O8W|1|A|C|956
6O8W|1|A|G|957
6O8W|1|A|A|958
6O8W|1|A|A|959
6O8W|1|A|U|960
6O8W|1|A|G|961
6O8W|1|A|C|962
6O8W|1|A|C|963

Current chains

Chain A

50S subunit

Nearby chains

Chain 0

50S ribosomal protein L30

Chain B

5S ribosomal RNA; 5S rRNA

Chain N

50S ribosomal protein L16

Chain X

50S ribosomal protein L27