IL_6O8X_011

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

UAG*CA

Length

5 nucleotides

Bulged bases

6O8X|1|A|A|318

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8X_011 not in the Motif Atlas

Geometric match to IL_1JZV_002

Geometric discrepancy: 0.2193

The information below is about IL_1JZV_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

6O8X|1|A|U|317
6O8X|1|A|A|318
6O8X|1|A|G|319
*
6O8X|1|A|C|394
6O8X|1|A|A|395

Current chains

Chain A

23S rRNA

Nearby chains