IL_6O8X_051
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- AUGAGUAG*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8X_051 not in the Motif Atlas
- Homologous match to IL_5J7L_289
- Geometric discrepancy: 0.1135
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
6O8X|1|A|A|1299
6O8X|1|A|U|1300
6O8X|1|A|G|1301
6O8X|1|A|A|1302
6O8X|1|A|G|1303
6O8X|1|A|U|1304
6O8X|1|A|A|1305
6O8X|1|A|G|1306
*
6O8X|1|A|U|2025
6O8X|1|A|G|2026
6O8X|1|A|A|2027
6O8X|1|A|A|2028
6O8X|1|A|A|2029
6O8X|1|A|U|2030
6O8X|1|A|U|2031
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain T
- 50S ribosomal protein L22
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