IL_6O8X_196

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

UGG*CUGA

Length

7 nucleotides

Bulged bases

6O8X|1|a|G|403

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8X_196 not in the Motif Atlas

Homologous match to IL_6CZR_128

Geometric discrepancy: 0.2072

The information below is about IL_6CZR_128

Detailed Annotation

Single bulged G, near cWW

Broad Annotation

Single bulged G, near cWW

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

6O8X|1|a|U|390
6O8X|1|a|G|391
6O8X|1|a|G|392
*
6O8X|1|a|C|401
6O8X|1|a|U|402
6O8X|1|a|G|403
6O8X|1|a|A|404

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16