3D structure

PDB id
6O8X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
Experimental method
ELECTRON MICROSCOPY
Resolution
3.68 Å

Loop

Sequence
GGAGGUAGAGCACU*AAACUCCGAAUGCC
Length
28 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6O8X|1|A|G|896
6O8X|1|A|G|897
6O8X|1|A|A|898
6O8X|1|A|G|899
6O8X|1|A|G|900
6O8X|1|A|U|901
6O8X|1|A|A|902
6O8X|1|A|G|903
6O8X|1|A|A|904
6O8X|1|A|G|905
6O8X|1|A|C|906
6O8X|1|A|A|907
6O8X|1|A|C|908
6O8X|1|A|U|909
*
6O8X|1|A|A|950
6O8X|1|A|A|951
6O8X|1|A|A|952
6O8X|1|A|C|953
6O8X|1|A|U|954
6O8X|1|A|C|955
6O8X|1|A|C|956
6O8X|1|A|G|957
6O8X|1|A|A|958
6O8X|1|A|A|959
6O8X|1|A|U|960
6O8X|1|A|G|961
6O8X|1|A|C|962
6O8X|1|A|C|963

Current chains

Chain A
23S rRNA

Nearby chains

Chain 0
50S ribosomal protein L30
Chain B
5S ribosomal RNA; 5S rRNA
Chain N
50S ribosomal protein L16
Chain W
50S ribosomal protein L25
Chain X
50S ribosomal protein L27

Coloring options:

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