3D structure

PDB id
6O8Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04
Experimental method
ELECTRON MICROSCOPY
Resolution
3.49 Å

Loop

Sequence
AGGAU*AUUUAAAGAGUGCGUAAUAGCUCACU
Length
31 nucleotides
Bulged bases
6O8Z|1|A|C|1142
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6O8Z|1|A|A|1094
6O8Z|1|A|G|1095
6O8Z|1|A|G|1096
6O8Z|1|A|A|1097
6O8Z|1|A|U|1098
*
6O8Z|1|A|A|1120
6O8Z|1|A|U|1121
6O8Z|1|A|U|1122
6O8Z|1|A|U|1123
6O8Z|1|A|A|1124
6O8Z|1|A|A|1125
6O8Z|1|A|A|1126
6O8Z|1|A|G|1127
6O8Z|1|A|A|1128
6O8Z|1|A|G|1129
6O8Z|1|A|U|1130
6O8Z|1|A|G|1131
6O8Z|1|A|C|1132
6O8Z|1|A|G|1133
6O8Z|1|A|U|1134
6O8Z|1|A|A|1135
6O8Z|1|A|A|1136
6O8Z|1|A|U|1137
6O8Z|1|A|A|1138
6O8Z|1|A|G|1139
6O8Z|1|A|C|1140
6O8Z|1|A|U|1141
6O8Z|1|A|C|1142
6O8Z|1|A|A|1143
6O8Z|1|A|C|1144
6O8Z|1|A|U|1145

Current chains

Chain A
23S rRNA

Nearby chains

Chain 6
50S ribosomal protein L36
Chain G
50S ribosomal protein L6

Coloring options:

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