IL_6O8Z_076

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CAG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8Z_076 not in the Motif Atlas

Homologous match to IL_7A0S_073

Geometric discrepancy: 0.1508

The information below is about IL_7A0S_073

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.8

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

43

Unit IDs

6O8Z|1|A|C|2064
6O8Z|1|A|A|2065
6O8Z|1|A|G|2066
*
6O8Z|1|A|C|2631
6O8Z|1|A|G|2632

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L32

Chain D

50S ribosomal protein L3