IL_6O8Z_134
3D structure
- PDB id
- 6O8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- UGAAGAAG*CGUAAAA
- Length
- 15 nucleotides
- Bulged bases
- 6O8Z|1|a|A|427
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8Z_134 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.2363
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
6O8Z|1|a|U|424
6O8Z|1|a|G|425
6O8Z|1|a|A|426
6O8Z|1|a|A|427
6O8Z|1|a|G|428
6O8Z|1|a|A|429
6O8Z|1|a|A|430
6O8Z|1|a|G|431
*
6O8Z|1|a|C|442
6O8Z|1|a|G|443
6O8Z|1|a|U|444
6O8Z|1|a|A|445
6O8Z|1|a|A|446
6O8Z|1|a|A|447
6O8Z|1|a|A|448
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
Coloring options: