IL_6O97_357

3D structure

PDB id

6O97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

6O97|1|2A|C|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O97_357 not in the Motif Atlas

Homologous match to IL_9DFE_060

Geometric discrepancy: 0.3628

The information below is about IL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46086.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

6O97|1|2A|U|1481
6O97|1|2A|G|1482
*
6O97|1|2A|C|1506
6O97|1|2A|A|1507
6O97|1|2A|A|1508
6O97|1|2A|C|1509
6O97|1|2A|A|1509|||A
6O97|1|2A|A|1509|||B
6O97|1|2A|G|1510

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains