IL_6O9J_014

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

6O9J|1|B|G|277

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O9J_014 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2974

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6O9J|1|B|C|274
6O9J|1|B|C|275
6O9J|1|B|U|276
6O9J|1|B|G|277
6O9J|1|B|A|278
6O9J|1|B|A|279
6O9J|1|B|U|280
6O9J|1|B|C|281
*
6O9J|1|B|G|359
6O9J|1|B|U|360
6O9J|1|B|G|361
6O9J|1|B|A|362
6O9J|1|B|G|363

Current chains

Chain B

23S rRNA

Nearby chains