IL_6O9J_172
3D structure
- PDB id
- 6O9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Elongation Competent Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CACA*UGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O9J_172 not in the Motif Atlas
- Geometric match to IL_8C3A_473
- Geometric discrepancy: 0.2703
- The information below is about IL_8C3A_473
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.2
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
6O9J|1|a|C|1407
6O9J|1|a|A|1408
6O9J|1|a|C|1409
6O9J|1|a|A|1410
*
6O9J|1|a|U|1490
6O9J|1|a|G|1491
6O9J|1|a|A|1492
6O9J|1|a|A|1493
6O9J|1|a|G|1494
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S12
Coloring options: