IL_6O9K_030

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O9K_030 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.1729

The information below is about IL_5J7L_274

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6O9K|1|A|G|875
6O9K|1|A|C|876
6O9K|1|A|A|877
6O9K|1|A|A|878
6O9K|1|A|G|879
*
6O9K|1|A|C|898
6O9K|1|A|A|899
6O9K|1|A|A|900
6O9K|1|A|C|901
6O9K|1|A|C|902

Current chains

Chain A

23S rRNA

Nearby chains