IL_6O9K_177
3D structure
- PDB id
- 6O9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAAAGC*GCUC
- Length
- 10 nucleotides
- Bulged bases
- 6O9K|1|A|A|1088
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O9K_177 not in the Motif Atlas
- Geometric match to IL_4LFB_068
- Geometric discrepancy: 0.3555
- The information below is about IL_4LFB_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25873.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6O9K|1|A|G|1087
6O9K|1|A|A|1088
6O9K|1|A|A|1089
6O9K|1|A|A|1090
6O9K|1|A|G|1091
6O9K|1|A|C|1092
*
6O9K|1|A|G|1099
6O9K|1|A|C|1100
6O9K|1|A|U|1101
6O9K|1|A|C|1102
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L10
- Chain H
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L11
- Chain Y
- 50S ribosomal protein L36
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