IL_6OF1_085

3D structure

PDB id

6OF1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUGUGAACC*GGGGAG

Length

15 nucleotides

Bulged bases

6OF1|1|1A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OF1|1|1A|C|2129
6OF1|1|1A|U|2130
6OF1|1|1A|G|2131
6OF1|1|1A|U|2132
6OF1|1|1A|G|2133
6OF1|1|1A|A|2134
6OF1|1|1A|A|2135
6OF1|1|1A|C|2136
6OF1|1|1A|C|2137
*
6OF1|1|1A|G|2154
6OF1|1|1A|G|2155
6OF1|1|1A|G|2156
6OF1|1|1A|G|2157
6OF1|1|1A|A|2158
6OF1|1|1A|G|2159

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains