3D structure

PDB id
6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GAGUG*CUC
Length
8 nucleotides
Bulged bases
6OF6|1|YA|A|1088
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OF6_274 not in the Motif Atlas
Homologous match to IL_7RQB_044
Geometric discrepancy: 0.2384
The information below is about IL_7RQB_044
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OF6|1|YA|G|1087
6OF6|1|YA|A|1088
6OF6|1|YA|G|1089
6OF6|1|YA|U|1090
6OF6|1|YA|G|1091
*
6OF6|1|YA|C|1100
6OF6|1|YA|U|1101
6OF6|1|YA|C|1102

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y9
50S ribosomal protein L36

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.362 s