3D structure

PDB id
6OFX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Non-rotated ribosome (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GCACUG*CAAAC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OFX|1|1|G|864
6OFX|1|1|C|865
6OFX|1|1|A|866
6OFX|1|1|C|867
6OFX|1|1|U|868
6OFX|1|1|G|869
*
6OFX|1|1|C|908
6OFX|1|1|A|909
6OFX|1|1|A|910
6OFX|1|1|A|911
6OFX|1|1|C|912

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 2
5S ribosomal RNA; 5S rRNA
Chain m
50S ribosomal protein L16

Coloring options:

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