IL_6OG7_183

3D structure

PDB id

6OG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUU*AAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OG7_183 not in the Motif Atlas

Geometric match to IL_8AF0_001

Geometric discrepancy: 0.2235

The information below is about IL_8AF0_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

6OG7|1|1|G|1483
6OG7|1|1|U|1484
6OG7|1|1|U|1485
*
6OG7|1|1|A|1504
6OG7|1|1|A|1505
6OG7|1|1|U|1506

Current chains

Chain 1

23S ribosomal RNA

Nearby chains