IL_6OGF_179

3D structure

PDB id

6OGF (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCCAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

6OGF|1|1|A|1046

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGF|1|1|C|1043
6OGF|1|1|C|1044
6OGF|1|1|C|1045
6OGF|1|1|A|1046
6OGF|1|1|G|1047
6OGF|1|1|A|1048
6OGF|1|1|C|1049
6OGF|1|1|A|1050
6OGF|1|1|G|1051
*
6OGF|1|1|U|1108
6OGF|1|1|C|1109
6OGF|1|1|G|1110
6OGF|1|1|A|1111
6OGF|1|1|G|1112

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6