IL_6OGF_185

3D structure

PDB id

6OGF (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGAGGUC*GAUGGAG

Length

14 nucleotides

Bulged bases

6OGF|1|1|A|1739

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGF|1|1|U|1720
6OGF|1|1|G|1721
6OGF|1|1|A|1722
6OGF|1|1|G|1723
6OGF|1|1|G|1724
6OGF|1|1|U|1725
6OGF|1|1|C|1726
*
6OGF|1|1|G|1734
6OGF|1|1|A|1735
6OGF|1|1|U|1736
6OGF|1|1|G|1737
6OGF|1|1|G|1738
6OGF|1|1|A|1739
6OGF|1|1|G|1740

Current chains

Chain 1

23S ribosomal RNA

Nearby chains