IL_6OJ2_088

3D structure

PDB id

6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCUAGG*CCAAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OJ2|1|RA|G|875
6OJ2|1|RA|C|876
6OJ2|1|RA|U|877
6OJ2|1|RA|A|878
6OJ2|1|RA|G|879
6OJ2|1|RA|G|880
*
6OJ2|1|RA|C|897
6OJ2|1|RA|C|898
6OJ2|1|RA|A|899
6OJ2|1|RA|A|900
6OJ2|1|RA|A|901
6OJ2|1|RA|C|902

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QY

Transfer RNA; tRNA

Chain RQ

50S ribosomal protein L16

Chain RZ

50S ribosomal protein L25