IL_6OJ2_115
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- AGAAG*UGGU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OJ2_115 not in the Motif Atlas
- Homologous match to IL_7RQB_060
- Geometric discrepancy: 0.119
- The information below is about IL_7RQB_060
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_07235.1
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6OJ2|1|RA|A|1469
6OJ2|1|RA|G|1470
6OJ2|1|RA|A|1471
6OJ2|1|RA|A|1472
6OJ2|1|RA|G|1473
*
6OJ2|1|RA|U|1520
6OJ2|1|RA|G|1521
6OJ2|1|RA|G|1522
6OJ2|1|RA|U|1523
Current chains
- Chain RA
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: