IL_6OJ2_122
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 6OJ2|1|RA|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OJ2_122 not in the Motif Atlas
- Geometric match to IL_7A0S_062
- Geometric discrepancy: 0.1275
- The information below is about IL_7A0S_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
6OJ2|1|RA|A|1669
6OJ2|1|RA|C|1670
6OJ2|1|RA|U|1671
6OJ2|1|RA|C|1672
6OJ2|1|RA|U|1673
6OJ2|1|RA|G|1674
*
6OJ2|1|RA|C|1990
6OJ2|1|RA|U|1991
6OJ2|1|RA|G|1992
6OJ2|1|RA|U|1993
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RE
- 50S ribosomal protein L3
- Chain RO
- 50S ribosomal protein L14
Coloring options: