IL_6OJ2_141

3D structure

PDB id

6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

6OJ2|1|RA|U|2167, 6OJ2|1|RA|A|2169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OJ2|1|RA|G|2124
6OJ2|1|RA|G|2125
6OJ2|1|RA|A|2126
6OJ2|1|RA|G|2127
*
6OJ2|1|RA|C|2161
6OJ2|1|RA|G|2162
6OJ2|1|RA|C|2163
6OJ2|1|RA|C|2164
6OJ2|1|RA|G|2165
6OJ2|1|RA|G|2166
6OJ2|1|RA|U|2167
6OJ2|1|RA|G|2168
6OJ2|1|RA|A|2169
6OJ2|1|RA|A|2170
6OJ2|1|RA|A|2171
6OJ2|1|RA|U|2172
6OJ2|1|RA|A|2173
6OJ2|1|RA|C|2174

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QW

Transfer RNA; tRNA