IL_6OJ2_280
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAUG*CUAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OJ2_280 not in the Motif Atlas
- Homologous match to IL_5J7L_295
- Geometric discrepancy: 0.1512
- The information below is about IL_5J7L_295
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
6OJ2|1|YA|C|1417
6OJ2|1|YA|G|1418
6OJ2|1|YA|A|1419
6OJ2|1|YA|U|1420
6OJ2|1|YA|G|1421
*
6OJ2|1|YA|C|1577
6OJ2|1|YA|U|1578
6OJ2|1|YA|A|1579
6OJ2|1|YA|A|1580
6OJ2|1|YA|G|1581
Current chains
- Chain YA
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: