IL_6OJ2_330
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CU*AUAAG
- Length
- 7 nucleotides
- Bulged bases
- 6OJ2|1|YA|A|2713
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OJ2_330 not in the Motif Atlas
- Homologous match to IL_7RQB_106
- Geometric discrepancy: 0.0654
- The information below is about IL_7RQB_106
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_71530.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
6OJ2|1|YA|C|2695
6OJ2|1|YA|U|2696
*
6OJ2|1|YA|A|2711
6OJ2|1|YA|U|2712
6OJ2|1|YA|A|2712|||A
6OJ2|1|YA|A|2713
6OJ2|1|YA|G|2714
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YR
- 50S ribosomal protein L17
- Chain YT
- 50S ribosomal protein L19
Coloring options: