IL_6OJ2_359

3D structure

PDB id

6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AGUUGCCAGC*GGGCACUCU

Length

19 nucleotides

Bulged bases

6OJ2|1|XA|U|1125, 6OJ2|1|XA|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OJ2|1|XA|A|1123
6OJ2|1|XA|G|1124
6OJ2|1|XA|U|1125
6OJ2|1|XA|U|1126
6OJ2|1|XA|G|1127
6OJ2|1|XA|C|1128
6OJ2|1|XA|C|1129
6OJ2|1|XA|A|1130
6OJ2|1|XA|G|1131
6OJ2|1|XA|C|1132
*
6OJ2|1|XA|G|1142
6OJ2|1|XA|G|1143
6OJ2|1|XA|G|1144
6OJ2|1|XA|C|1145
6OJ2|1|XA|A|1146
6OJ2|1|XA|C|1147
6OJ2|1|XA|U|1148
6OJ2|1|XA|C|1149
6OJ2|1|XA|U|1150

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10