IL_6OL3_001

3D structure

PDB id

6OL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of an adenovirus virus-associated RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.74 Å

Loop

Sequence

AAG*CAGGUGU

Length

10 nucleotides

Bulged bases

6OL3|1|C|G|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51191.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

6OL3|1|C|A|35
6OL3|1|C|A|36
6OL3|1|C|G|37
*
6OL3|1|C|C|122
6OL3|1|C|A|123
6OL3|1|C|G|124
6OL3|1|C|G|125
6OL3|1|C|U|126
6OL3|1|C|G|127
6OL3|1|C|U|128

Current chains

Chain C

Adenovirus Virus-Associated (VA) RNA I apical and central domains

Nearby chains