IL_6OLG_007

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAUCC*GACAUGUGG

Length

16 nucleotides

Bulged bases

6OLG|1|A2|G|119, 6OLG|1|A2|G|148

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|C|118
6OLG|1|A2|G|119
6OLG|1|A2|A|120
6OLG|1|A2|A|121
6OLG|1|A2|U|122
6OLG|1|A2|C|123
6OLG|1|A2|C|124
*
6OLG|1|A2|G|143
6OLG|1|A2|A|144
6OLG|1|A2|C|145
6OLG|1|A2|A|146
6OLG|1|A2|U|147
6OLG|1|A2|G|148
6OLG|1|A2|U|149
6OLG|1|A2|G|150
6OLG|1|A2|G|151

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A3

5.8S ribosomal RNA; 5.8S rRNA

Chain AG

60S ribosomal protein L7a

Chain AN

60S ribosomal protein L15

Chain Ah

60S ribosomal protein L35