IL_6OLG_048

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGCGCGAC*GGUCGCGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|G|1072
6OLG|1|A2|G|1073
6OLG|1|A2|C|1074
6OLG|1|A2|G|1075
6OLG|1|A2|C|1076
6OLG|1|A2|G|1077
6OLG|1|A2|A|1078
6OLG|1|A2|C|1079
*
6OLG|1|A2|G|1182
6OLG|1|A2|G|1183
6OLG|1|A2|U|1184
6OLG|1|A2|C|1185
6OLG|1|A2|G|1186
6OLG|1|A2|C|1187
6OLG|1|A2|G|1188
6OLG|1|A2|C|1189

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AF

60S ribosomal protein L7

Chain AS

60S ribosomal protein L18a

Chain AT

60S ribosomal protein L21