3D structure

PDB id
6OLG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CCG*CG
Length
5 nucleotides
Bulged bases
6OLG|1|A2|C|1902
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLG|1|A2|C|1901
6OLG|1|A2|C|1902
6OLG|1|A2|G|1903
*
6OLG|1|A2|C|2043
6OLG|1|A2|G|2044

Current chains

Chain A2
28S ribosomal RNA

Nearby chains

Chain A4
5S ribosomal RNA; 5S rRNA
Chain AF
60S ribosomal protein L7
Chain AM
60S ribosomal protein L14
Chain AO
60S ribosomal protein L13a
Chain AS
60S ribosomal protein L18a
Chain Af
60S ribosomal protein L35a

Coloring options:

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