IL_6OLG_161

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAAACGG*CCUCGCC

Length

15 nucleotides

Bulged bases

6OLG|1|A2|C|4884

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|G|4848
6OLG|1|A2|G|4849
6OLG|1|A2|A|4850
6OLG|1|A2|A|4851
6OLG|1|A2|A|4852
6OLG|1|A2|C|4853
6OLG|1|A2|G|4854
6OLG|1|A2|G|4855
*
6OLG|1|A2|C|4881
6OLG|1|A2|C|4882
6OLG|1|A2|U|4883
6OLG|1|A2|C|4884
6OLG|1|A2|G|4885
6OLG|1|A2|C|4886
6OLG|1|A2|C|4887

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AE

60S ribosomal protein L6

Chain AM

60S ribosomal protein L14

Chain AO

60S ribosomal protein L13a