IL_6OLG_191

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAC*GGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLG_191 not in the Motif Atlas

Geometric match to IL_4WFL_001

Geometric discrepancy: 0.2784

The information below is about IL_4WFL_001

Detailed Annotation

Double sheared with non-canonical cWW

Broad Annotation

Double sheared

Motif group

IL_87767.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

17

Unit IDs

6OLG|1|B1|C|188
6OLG|1|B1|U|189
6OLG|1|B1|G|190
6OLG|1|B1|A|191
6OLG|1|B1|C|192
*
6OLG|1|B1|G|207
6OLG|1|B1|G|208
6OLG|1|B1|A|209
6OLG|1|B1|U|210
6OLG|1|B1|G|211

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BI

40S ribosomal protein S8