IL_6OLG_224
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGGUUC*GUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLG_224 not in the Motif Atlas
- Geometric match to IL_4V88_435
- Geometric discrepancy: 0.2653
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6OLG|1|B1|A|1042
6OLG|1|B1|G|1043
6OLG|1|B1|G|1044
6OLG|1|B1|U|1045
6OLG|1|B1|U|1046
6OLG|1|B1|C|1047
*
6OLG|1|B1|G|1071
6OLG|1|B1|U|1072
6OLG|1|B1|U|1073
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AA
- 60S ribosomal protein L8
- Chain Ap
- 60S ribosomal protein L37a
- Chain BO
- 40S ribosomal protein S14
- Chain Ba
- 40S ribosomal protein S26
Coloring options: