IL_6OLG_249

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

6OLG|1|B1|C|1554, 6OLG|1|B1|A|1580

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|B1|G|1550
6OLG|1|B1|U|1551
6OLG|1|B1|G|1552
6OLG|1|B1|C|1553
6OLG|1|B1|C|1554
6OLG|1|B1|U|1555
6OLG|1|B1|A|1556
6OLG|1|B1|C|1557
6OLG|1|B1|C|1558
*
6OLG|1|B1|G|1577
6OLG|1|B1|U|1578
6OLG|1|B1|A|1579
6OLG|1|B1|A|1580
6OLG|1|B1|C|1581
6OLG|1|B1|C|1582

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BD

40S ribosomal protein S3

Chain BK

40S ribosomal protein S10

Chain BT

40S ribosomal protein S19

Chain BU

40S ribosomal protein S20

Chain Bd

40S ribosomal protein S29