IL_6OLG_265

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCGGCGCCGCUCGUG*CCGGCGCGCG

Length

25 nucleotides

Bulged bases

6OLG|1|A2|C|182, 6OLG|1|A2|G|183, 6OLG|1|A2|U|184

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|C|171
6OLG|1|A2|C|172
6OLG|1|A2|G|173
6OLG|1|A2|G|174
6OLG|1|A2|C|175
6OLG|1|A2|G|176
6OLG|1|A2|C|177
6OLG|1|A2|C|178
6OLG|1|A2|G|179
6OLG|1|A2|C|180
6OLG|1|A2|U|181
6OLG|1|A2|C|182
6OLG|1|A2|G|183
6OLG|1|A2|U|184
6OLG|1|A2|G|185
*
6OLG|1|A2|C|248
6OLG|1|A2|C|249
6OLG|1|A2|G|250
6OLG|1|A2|G|251
6OLG|1|A2|C|252
6OLG|1|A2|G|253
6OLG|1|A2|C|254
6OLG|1|A2|G|255
6OLG|1|A2|C|256
6OLG|1|A2|G|257

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A3

5.8S ribosomal RNA; 5.8S rRNA

Chain AL

60S ribosomal protein L13

Chain AY

60S ribosomal protein L26

Chain Ah

60S ribosomal protein L35

Chain Aj

60S ribosomal protein L37